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@reichlab The Reich Lab at UMass-Amherst

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    147 repositories

    • variant-nowcast-hub-dashboard

      Public
      Dashboard pages and analyses for the US SARS-CoV-2 Variant Nowcast Hub
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•1•15•0•Updated Apr 25, 2026Apr 25, 2026

    • reichlab.github.io

      Public
      The website for the Reich Lab @ UMass-Amherst.
      HTML
      •
      Apache License 2.0
      •48•17•6•0•Updated Apr 24, 2026Apr 24, 2026

    • variant-nowcast-hub

      Public
      A repository to store COVID-19 variant nowcasts collected as a modeling hub.
      R
      •
      MIT License
      •15•21•3•0•Updated Apr 24, 2026Apr 24, 2026

    • flusight-dashboard

      Public
      Dashboard for CDC's FluSight prediction exercise.
      Creative Commons Zero v1.0 Universal
      •4•1•0•0•Updated Apr 23, 2026Apr 23, 2026

    • covidhub-dashboard

      Public
      Dashboard for the CDC's COVID-19 Forecast Hub
      Creative Commons Zero v1.0 Universal
      •2•1•0•1•Updated Apr 23, 2026Apr 23, 2026

    • metrocast-dashboard

      Public
      Dashboard website for the epiENGAGE Flu Metrocast Hub.
      Creative Commons Zero v1.0 Universal
      •3•1•1•1•Updated Apr 23, 2026Apr 23, 2026

    • forecast-sandbox-2025-2026-dashboard

      Public
      Dashboard repo for 2025/2026 forecast sandbox
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Apr 23, 2026Apr 23, 2026

    • sismid-ili-forecasting-dashboard

      Public
      The dashboard repo for SISMID ILI forecasting project
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Apr 23, 2026Apr 23, 2026

    • flu-metrocast

      Public
      Short-term forecasts for influenza at the city- and county-level
      R
      •
      MIT License
      •16•9•5•0•Updated Apr 23, 2026Apr 23, 2026

    • metrocast-sandbox-2025-2026

      Public
      Sandbox hub for testing metrocast models
      Python
      •
      MIT License
      •0•1•0•1•Updated Apr 23, 2026Apr 23, 2026

    • FluSight-forecast-hub

      Public
      FluSight-forecast-hub fork for cloud onboarding
      HTML
      •
      MIT License
      •111•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • cdcgov-covid19-forecast-hub

      Public
      A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.
      Apache License 2.0
      •31•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • cholera

      Public
      0•0•0•0•Updated Apr 20, 2026Apr 20, 2026

    • covid19-forecast-hub-web-1

      Public archive
      Source for the COVID 19 forecast hub website
      HTML
      •
      Other
      •11•0•0•0•Updated Apr 10, 2026Apr 10, 2026

    • covid19-forecast-hub-web

      Public archive
      Source for the COVID 19 forecast hub website
      HTML
      •
      Other
      •11•8•0•0•Updated Apr 10, 2026Apr 10, 2026

    • decisions

      Public
      A public record of decisions made for lab projects
      HTML
      •
      The Unlicense
      •0•2•1•0•Updated Apr 7, 2026Apr 7, 2026

    • operational-models

      Public
      Repository for automating runs of operational disease forecasting models.
      R
      •
      MIT License
      •1•1•3•0•Updated Mar 26, 2026Mar 26, 2026

    • get-covid-clade-counts

      Public
      Create virus clade count data and save to an S3 Bucket using functionality from virus-clade-utils
      Python
      •
      MIT License
      •0•0•5•0•Updated Mar 25, 2026Mar 25, 2026

    • idmodels

      Public
      Infectious disease models in Python
      Python
      •
      MIT License
      •0•4•4•1•Updated Mar 24, 2026Mar 24, 2026

    • forecast-sandbox-2025-2026

      Public
      Sandbox for models and forecasts for the 2025/2026 forecasting season
      Python
      •
      MIT License
      •1•1•1•0•Updated Mar 23, 2026Mar 23, 2026

    • predictability

      Public
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Mar 20, 2026Mar 20, 2026

    • variant-nowcast-model-dev-retro

      Public
      Retrospective model dev for UMass models for variant-nowcast-hub
      R
      •
      MIT License
      •0•2•3•2•Updated Mar 4, 2026Mar 4, 2026

    • cladetime

      Public
      Python interface for accessing Nextstrain SARS-CoV-2 sequence and clade data
      Python
      •
      MIT License
      •2•6•8•3•Updated Feb 2, 2026Feb 2, 2026

    • flusight-dashboard-staging

      Public
      Staging version of flusight-dashboard -- used to demo updates
      Creative Commons Zero v1.0 Universal
      •4•0•0•0•Updated Jan 22, 2026Jan 22, 2026

    • iddata

      Public
      Python module for accessing infectious disease data
      Python
      •
      MIT License
      •0•1•6•0•Updated Jan 15, 2026Jan 15, 2026

    • predtimechart

      Public
      JavaScript
      •
      MIT License
      •1•1•23•0•Updated Jan 15, 2026Jan 15, 2026

    • sarix

      Public
      Seasonal Auto-Regressive Integrated models with eXogenous predictors
      Jupyter Notebook
      •
      MIT License
      •2•1•2•1•Updated Nov 17, 2025Nov 17, 2025

    • malaria-serology

      Public
      R
      •0•0•0•0•Updated Nov 7, 2025Nov 7, 2025

    • variant-scoring

      Public
      Code and vignettes around scoring variant nowcasts derived from the SARS-CoV-2 Variant Nowcast Hub.
      HTML
      •0•0•0•1•Updated Oct 30, 2025Oct 30, 2025

    • reporule

      Public
      CLI for standardizing repo rulesets for a GitHub org or user
      Python
      •
      MIT License
      •0•2•0•5•Updated Oct 27, 2025Oct 27, 2025
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