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    31 repositories

    • ligand_receptor_mr

      Public
      R
      •1•0•0•0•Updated Feb 17, 2026Feb 17, 2026

    • EXWAS_pipeline

      Public
      Python
      •
      MIT License
      •0•2•3•0•Updated Oct 20, 2025Oct 20, 2025

    • T2D_kidney_protein_mediators_PUBLIC

      Public
      Public version of Repository: T2D Kidney program
      R
      •1•0•0•0•Updated Feb 22, 2025Feb 22, 2025

    • IntAct_Report

      Public
      Explore whether the molecular interactions can improve causal gene identifications by IntAct database
      R
      •1•0•0•0•Updated Jan 30, 2025Jan 30, 2025

    • ExWAS_using_AlphaMissense

      Public
      R
      •0•1•0•0•Updated Aug 18, 2024Aug 18, 2024

    • EyeArt_Streamline

      Public
      Python
      •0•0•1•0•Updated Aug 9, 2024Aug 9, 2024

    • BQC_Ancestry_Proteomics

      Public
      Using the BQC19 to observe how ancestry affects the circulating proteins of pateints with and without COVID-19
      R
      •0•0•0•0•Updated Mar 7, 2024Mar 7, 2024

    • COVID19-sQTLMR

      Public
      R
      •0•1•0•0•Updated Feb 19, 2024Feb 19, 2024

    • metabolomics_GWAS_CLSA

      Public
      R
      •2•19•1•0•Updated Jan 8, 2024Jan 8, 2024

    • dynamic_QTL_COVID19

      Public
      R
      •0•1•0•1•Updated Jun 8, 2023Jun 8, 2023

    • gtex-pipeline

      Public
      GTEx & TOPMed data production and analysis pipelines
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •186•0•0•2•Updated Mar 6, 2023Mar 6, 2023

    • MRutils

      Public
      A repository that builds and defines the environment needed for doing MR, and a few utility methods to boot.
      R
      •
      Other
      •1•5•6•0•Updated Dec 29, 2022Dec 29, 2022

    • slalom

      Public
      SLALOM (suspicious loci analysis of meta-analysis summary statistics)
      Python
      •
      MIT License
      •5•0•0•0•Updated Nov 17, 2022Nov 17, 2022

    • snappy

      Public
      Shell
      •0•2•0•0•Updated Nov 16, 2022Nov 16, 2022

    • LDlinkR

      Public
      LDlinkR
      R
      •10•0•0•0•Updated Sep 15, 2022Sep 15, 2022

    • Terra_synchronizer

      Public
      A python tool for synchronizing a local directory & json file with a Terra data-table
      Python
      •
      MIT License
      •1•0•3•0•Updated Jul 12, 2022Jul 12, 2022

    • NPNT_COVID19

      Public
      0•0•0•0•Updated Jul 11, 2022Jul 11, 2022

    • aFC

      Public
      Calculates allelic Fold Change (aFC) using standard input files for fastQTL.
      Python
      •11•0•0•0•Updated Jul 4, 2022Jul 4, 2022

    • BQC19_genotype_pipeline

      Public
      R
      •0•1•0•0•Updated Jun 24, 2022Jun 24, 2022

    • pyqtl

      Public
      Collection of analysis tools for quantitative trait loci
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •12•0•0•0•Updated Jun 18, 2022Jun 18, 2022

    • COVID19-LongCOVID-epidemiology

      Public
      R
      •0•0•0•0•Updated Jun 13, 2022Jun 13, 2022

    • wiki

      Public
      0•0•0•0•Updated Mar 15, 2022Mar 15, 2022

    • kallisto

      Public
      WDL
      •0•0•0•0•Updated Feb 9, 2022Feb 9, 2022

    • project_template

      Public template
      A template for a project with CI and a docker image
      Shell
      •
      MIT License
      •0•0•0•0•Updated Nov 23, 2021Nov 23, 2021

    • OAS1_followup

      Public
      R
      •0•0•0•0•Updated Jun 30, 2021Jun 30, 2021

    • VitaminD_COVID_MR

      Public
      An attempt to recreate Guillaummes V-D/COVID MR paper
      R
      •0•2•0•0•Updated May 3, 2021May 3, 2021

    • RPackageTemplate

      Public template
      A Template for setting up an R project
      Dockerfile
      •0•0•0•1•Updated Apr 13, 2021Apr 13, 2021

    • Ei

      Public
      Data and code for the Effector index
      R
      •1•14•4•0•Updated Oct 13, 2020Oct 13, 2020

    • MR-VEGF-Osteoporosis

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Jun 20, 2019Jun 20, 2019

    • Mendelian-Randomization

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Jun 10, 2019Jun 10, 2019
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