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@twlab Ting Wang Lab

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    37 repositories

    • eg3

      Public
      WashU Epigenome Browser (3rd generation, since 2025)
      data-visualizationwashu-epigenome-browserepigenome
      data-visualizationwashu-epigenome-browserepigenome
      TypeScript
      •
      Other
      •4•13•18•2•Updated Apr 23, 2026Apr 23, 2026

    • bg-epigenome-portal

      Public
      Basal Ganglia Epigenome
      TypeScript
      •
      MIT License
      •1•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • embed-eg3

      Public
      Embed the 3rd generation of the WashU Epigenome Browser
      TypeScript
      •1•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • ReferenceAlignmentBias

      Public
      Python
      •0•0•0•0•Updated Apr 19, 2026Apr 19, 2026

    • BRFG

      Public
      HTML
      •0•0•0•0•Updated Apr 19, 2026Apr 19, 2026

    • cig-pipelines

      Public
      WDL
      •0•2•0•0•Updated Apr 16, 2026Apr 16, 2026

    • EyeEpigenome

      Public
      Web portal for the Eye Epigenomes in human
      eyeepigenomics
      eyeepigenomics
      TypeScript
      •0•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • target-portal

      Public
      TaRGET-II Data Portal
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Apr 9, 2026Apr 9, 2026

    • twlab

      Public
      website code
      SCSS
      •0•1•0•0•Updated Apr 9, 2026Apr 9, 2026

    • HPRCEB

      Public
      HPRC Epigenome Browser
      TypeScript
      •
      MIT License
      •0•0•0•0•Updated Mar 5, 2026Mar 5, 2026

    • smaht-web

      Public
      web portal for smaht project
      Astro
      •
      MIT License
      •0•0•0•0•Updated Feb 4, 2026Feb 4, 2026

    • cig-compute-clinic

      Public
      CIG Compute Clinic is a bimonthly meeting to discuss pipelines, HPC, and resource usages.
      0•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • SMaHT_Pangenome_Benchmark

      Public
      This repository holds scripts and data for "Leveraging Human Pangenome for Improved Somatic Variant Detection" paper.
      Python
      •
      MIT License
      •1•1•0•0•Updated Dec 5, 2025Dec 5, 2025

    • igvf-catalog-docs

      Public
      MDX
      •1•1•0•0•Updated Nov 12, 2025Nov 12, 2025

    • open-data-examples

      Public
      open data from Ting Wang Lab
      Jupyter Notebook
      •0•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • encode-dcc-hic-pipeline

      Public
      HiC uniform processing pipeline
      WDL
      •
      MIT License
      •23•0•0•0•Updated Jul 21, 2025Jul 21, 2025

    • ZilanXin_ELN

      Public
      Electronic Lab Notebook of Zilan Xin
      0•0•0•0•Updated Jun 16, 2025Jun 16, 2025

    • Ixchel

      Public
      Python
      •0•3•1•0•Updated May 27, 2025May 27, 2025

    • methylGrapher

      Public
      Methylation analysis pipeline for genome graph
      methylationalignmentwgbs
      methylationalignmentwgbsgenome-graph
      Python
      •
      MIT License
      •1•15•1•0•Updated May 25, 2025May 25, 2025

    • Repeat-Browser

      Public
      A web-based visualizing tool for repeat analysis.
      JavaScript
      •0•1•0•0•Updated Nov 25, 2024Nov 25, 2024

    • ENCODE_TE

      Public
      Various code for "Regulatory Transposable Elements in the Encyclopedia of DNA Elements"
      Python
      •
      MIT License
      •0•3•0•0•Updated Jul 25, 2024Jul 25, 2024

    • epitherapy_induced_antigen_GBM

      Public
      Python
      •1•4•0•0•Updated Jun 16, 2024Jun 16, 2024

    • Repeat-Browser_data_processing

      Public
      This repo provides a data processing pipeline for the WashU Repeat Browser.
      C
      •0•0•0•0•Updated May 31, 2024May 31, 2024

    • eg-react

      Public
      The new WashU Epigenome Browser
      JavaScript
      •
      Other
      •31•0•0•0•Updated Sep 7, 2023Sep 7, 2023

    • LRCAGE

      Public
      Python
      •
      MIT License
      •1•2•0•0•Updated Jul 22, 2023Jul 22, 2023

    • TEProf2Paper

      Public
      TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
      Python
      •
      Other
      •11•30•8•0•Updated May 5, 2023May 5, 2023

    • comparative-browser-landing-page

      Public
      Svelte
      •1•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • novel3dte

      Public
      Code associated with "Widespread contribution of transposable elements to the rewiring of mammalian 3D genomes " by Choudhary and Quaid et. al
      Python
      •0•1•0•0•Updated Jan 13, 2023Jan 13, 2023

    • .github

      Public
      0•0•0•0•Updated Nov 22, 2022Nov 22, 2022

    • repeatbrowser

      Public
      JavaScript
      •1•2•0•0•Updated May 21, 2022May 21, 2022
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