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    22 repositories

    • samtools-pileup-tool

      Public
      Python
      •6•0•0•0•Updated Nov 5, 2018Nov 5, 2018

    • radia-tool

      Public
      Python
      •3•0•0•0•Updated Mar 12, 2018Mar 12, 2018

    • somaticsniper-tool

      Public
      Python
      •6•0•0•0•Updated Mar 2, 2017Mar 2, 2017

    • fpfilter-tool

      Public
      Perl
      •21•6•4•0•Updated Nov 30, 2016Nov 30, 2016

    • genetorrent-tool

      Public
      Python
      •3•0•0•0•Updated Oct 4, 2016Oct 4, 2016

    • pindel-tool

      Public
      Python
      •8•1•0•0•Updated Mar 29, 2016Mar 29, 2016

    • pcawg_tools

      Public
      Python
      •9•4•0•0•Updated Mar 25, 2016Mar 25, 2016

    • varscan-tool

      Public
      Python
      •5•0•0•0•Updated Mar 16, 2016Mar 16, 2016

    • muse-tool

      Public
      Python
      •7•0•1•0•Updated Mar 15, 2016Mar 15, 2016

    • gatk-cocleaning-tool

      Public
      Python
      •5•1•0•0•Updated Dec 12, 2015Dec 12, 2015

    • icgc_rnaseq_align

      Public
      Python
      •17•4•0•1•Updated Sep 28, 2015Sep 28, 2015

    • tcgavcf-tool

      Public
      Python
      •7•0•1•0•Updated Sep 24, 2015Sep 24, 2015

    • icgc-pcap-tools

      Public
      Python
      •0•0•0•0•Updated Jul 22, 2015Jul 22, 2015

    • broad-variant-pipeline-tool

      Public
      Shell
      •1•0•0•0•Updated Jul 13, 2015Jul 13, 2015

    • radia

      Public
      RADIA: RNA and DNA Integrated Analysis for Somatic Mutation Detection
      Python
      •
      GNU Affero General Public License v3.0
      •11•0•0•0•Updated Jul 6, 2015Jul 6, 2015

    • pathway_tools

      Public
      Tools for working with UCSC super pathway
      Python
      •6•10•1•1•Updated May 19, 2015May 19, 2015

    • smc_het_example

      Public
      R
      •1•0•0•0•Updated Apr 14, 2015Apr 14, 2015

    • pathmark-scripts

      Public
      JavaScript
      •3•1•0•0•Updated Feb 19, 2015Feb 19, 2015

    • paradigm-scripts

      Public
      Python
      •11•7•0•0•Updated Feb 17, 2015Feb 17, 2015

    • superpathway_db

      Public
      The UCSC SuperPathway
      3•4•5•0•Updated Jul 23, 2014Jul 23, 2014

    • cgData

      Public
      Python API to work with the cgData standard
      Python
      •8•8•0•0•Updated Apr 2, 2013Apr 2, 2013

    • cgDataV2

      Public
      Version 2 of the cgData API
      Python
      •0•1•0•0•Updated Jul 31, 2012Jul 31, 2012
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