[RDF][Docs] Group the RInterface API in doxygen into Actions / Transformations / General

bindings/pyroot/pythonizations/doc/index.md

@@ -1,285 +1,119 @@
-\defgroup Pythonizations Python interface
-\brief Python-specific functionalities offered by ROOT
-
-This page lists the so-called "pythonizations", that is those functionalities offered by ROOT for classes and functions which are specific to Python usage of the package and provide a more pythonic experience.
-
-### Pythonization example 
-
-This example shows how to use the `@pythonization` decorator to add extra
-behaviour to C++ user classes that are used from Python via PyROOT.
-Let's first define a new C++ class. In this tutorial, we will see how we can
-"pythonize" this class, i.e. how we can add some extra behaviour to it to
-make it more pythonic or easier to use from Python.
-Note: In this example, the class is defined dynamically for demonstration
-purposes, but it could also be a C++ class defined in some library or header.
-For more information about loading C++ user code to be used from Python with
-PyROOT, please see:
-https://root.cern.ch/manual/python#loading-user-libraries-and-just-in-time-compilation-jitting
-
-~~~{.py}
-ROOT.gInterpreter.Declare("""
-class MyClass {};
-""")
-~~~
-
-Next, we define a pythonizor function: the function that will be responsible
-for injecting new behaviour in our C++ class `MyClass`. 
-To convert a given Python function into a pythonizor, we need to decorate it
-with the @pythonization decorator. Such decorator allows us to define which
-which class we want to pythonize by providing its class name and its
-namespace (if the latter is not specified, it defaults to the global
-namespace, i.e. '::').  
-The decorated function - the pythonizor - must accept either one or two
-parameters:
-1. The class to be pythonized (proxy object where new behaviour can be
-injected)
-2. The fully-qualified name of that class (optional).   
-Let's see all this with a simple example. Suppose I would like to define how
-`MyClass` objects are represented as a string in Python (i.e. what would be
-shown when I print that object). For that purpose, I can define the following
-pythonizor function. There are two important things to be noted here:
-- The @pythonization decorator has one argument that specifies our target
-class is `MyClass`.
-- The pythonizor function `pythonizor_of_myclass` provides and injects a new
-implementation for `__str__`, the mechanism that Python provides to define
-how to represent objects as strings. This new implementation
-always returns the string "This is a MyClass object".
-
-~~~{.py}
-@pythonization('MyClass')
-def pythonizor_of_myclass(klass):
-    klass.__str__ = lambda o : 'This is a MyClass object'
-~~~
-Once we have defined our pythonizor function, let's see it in action.
-We will now use the `MyClass` class for the first time from Python: we will
-create a new instance of that class. At this moment, the pythonizor will
-execute and modify the class - pythonizors are always lazily run when a given
-class is used for the first time from a Python script.
-
-~~~{.py}
-my_object = ROOT.MyClass()
-~~~
-
-Since the pythonizor already executed, we should now see the new behaviour.
-For that purpose, let's print `my_object` (should show "This is a MyClass
-object").
-
-~~~{.py}
-print(my_object)
-~~~
-
-The previous example is just a simple one, but there are many ways in which a
-class can be pythonized. Typical examples are the redefinition of dunder
-methods (e.g. `__iter__` and `__next__` to make your objects iterable from
-Python). If you need some inspiration, many ROOT classes are pythonized in
-the way we just saw; their pythonizations can be seen at:
-<https://github.com/root-project/root/tree/master/bindings/pyroot/pythonizations/python/ROOT/_pythonization>
-The @pythonization decorator offers a few more options when it comes to
-matching classes that you want to pythonize. We saw that we can match a
-single class, but we can also specify a list of classes to pythonize.
-The following code defines a couple of new classes:
-
-~~~{.py}
-ROOT.gInterpreter.Declare("""
-namespace NS {
-    class Class1 {};
-    class Class2 {};
+\defgroup Python Python Interface
+\ingroup Python
+\brief Python bindings and utilities for ROOT.
+
+
+ROOT is a C++ framework used across HEP for data storage, analysis and visualisation. Its full API is available directly in Python through dynamic bindings powered by [cppyy](https://cppyy.readthedocs.io/). Every ROOT class you see in the
+C++ documentation is accessible from Python under the `ROOT` module.
+
+On top of that, a set of [pythonizations](@ref Pythonizations) adapt selected classes to feel more natively Pythonic: operator overloading, iterators, NumPy interoperability, and more.
+
+
+# Installation
+
+\htmlonly
+<div class="install-tabs">
+  <div class="tab-buttons">
+    <button class="tab-btn active" onclick="switchTab(this, 'conda')">conda</button>
+    <button class="tab-btn" onclick="switchTab(this, 'pip')">pip</button>
+  </div>
+  <div id="conda" class="tab-panel active">
+    <pre><code>conda install -c conda-forge root</code></pre>
+  </div>
+  <div id="pip" class="tab-panel" style="display:none;">
+    <pre><code>pip install root</code></pre>
+    <p style="margin:6px 12px 10px;font-size:12px;color:#b45309;background:#fffbeb;
+              border:1px solid #fcd34d;border-radius:4px;padding:6px 10px;">
+      ⚠ Alpha - Linux only.
+    </p>
+  </div>
+</div>
+
+<style>
+.install-tabs {
+  border: 1px solid var(--page-foreground-color, #ccc);
+  border-radius: 6px;
+  overflow: hidden;
+  max-width: 420px;
+  font-family: monospace;
 }
-""")
-~~~
-
-Note that these classes belong to the `NS` namespace. As mentioned above, the
-@pythonization decorator accepts a parameter with the namespace of the class
-or classes to be pythonized. Therefore, a pythonizor that matches both classes
-would look like this:
-
-~~~{.py}
-@pythonization(['Class1', 'Class2'], ns='NS')
-def pythonize_two_classes(klass):
-    klass.new_attribute = 1
-~~~
-
-Both classes will have the new attribute:
-
-~~~{.py}
-o1 = ROOT.NS.Class1()
-o2 = ROOT.NS.Class2()
-print("Printing new attribute")
-for o in o1, o2:
-    print(o.new_attribute)
-~~~
-
-In addition, @pythonization also accepts prefixes of classes in a certain
-namespace in order to match multiple classes in that namespace. To signal that
-what we provide to @pythonization is a prefix, we need to set the `is_prefix`
-argument to `True` (default is `False`).    
-A common case where matching prefixes is useful is when we have a templated
-class and we want to pythonize all possible instantiations of that template.
-For example, we can pythonize the `std::vector` (templated) class like so:
-
-~~~{.py}
-@pythonization('vector<', ns='std', is_prefix=True)
-def vector_pythonizor(klass):
-    # first_elem returns the first element of the vector if it exists
-    klass.first_elem = lambda v : v[0] if v else None
-~~~
-
-Since we defined a prefix to do the match, the pythonization will be applied
-both if we instantiate e.g. a vector of integers and a vector of doubles.
-
-~~~{.py}
-v_int = ROOT.std.vector['int']([1,2,3])
-v_double = ROOT.std.vector['double']([4.,5.,6.])
-print("First element of integer vector: {}".format(v_int.first_elem()))
-print("First element of double vector: {}".format(v_double.first_elem()))
-~~~
-
-These are some examples of combinations of prefixes and namespaces and the
-corresponding classes that they match:
-- '' : all classes in the global namespace.
-- '', ns='NS1::NS2' : all classes in the `NS1::NS2` namespace.
-- 'Prefix' : classes whose name starts with `Prefix` in the global namespace.
-- 'Prefix', ns='NS' : classes whose name starts with `Prefix` in the `NS`
-namespace
-Moreover, a pythonizor function can have a second optional parameter that
-contains the fully-qualified name of the class being pythonized. This can be
-useful e.g. if we would like to do some more complex filtering of classes in
-our pythonizor, for instance using regular expressions.
-
-~~~{.py}
-@pythonization('pair<', ns='std', is_prefix=True)
-def pair_pythonizor(klass, name):
-    print('Pythonizing class ' + name)
-~~~
-
-The pythonizor above will be applied to any instantiation of `std::pair` - we
-can see this with the print we did inside the pythonizor.
-Note that we could use the `name` parameter to e.g. further filter which
-particular instantiations we would like to pythonize.
-
-~~~{.py}
-p1 = ROOT.std.pair['int','int'](1,2) # prints 'Pythonizing class std::pair<int,int>'
-p2 = ROOT.std.pair['int','double'](1,2.) # prints 'Pythonizing class std::pair<intdouble>'
-~~~
-
-Note that, to pythonize multiple classes in different namespaces, we can
-stack multiple @pythonization decorators. For example, if we define these
-classes:
-
-~~~{.py}
-ROOT.gInterpreter.Declare("""
-class FirstClass {};
-namespace NS {
-    class SecondClass {};
+.tab-buttons {
+  display: flex;
+  background: var(--code-background, #f0f0f0);
+  border-bottom: 1px solid var(--page-foreground-color, #ccc);
 }
-""")
-~~~
-
-We can pythonize both of them with a single pythonizor function like so:
-
-~~~{.py}
-@pythonization('FirstClass')
-@pythonization('SecondClass', ns='NS')
-def pythonizor_for_first_and_second(klass, name):
-    print('Executed for class ' + name)
-~~~
-
-If we now access both classes, we should see that the pythonizor runs twice.
-
-~~~{.py}
-f = ROOT.FirstClass()
-s = ROOT.NS.SecondClass()
-~~~
+.tab-btn {
+  padding: 6px 18px;
+  border: none;
+  background: none;
+  cursor: pointer;
+  font-size: 13px;
+  color: var(--page-foreground-color, #333);
+  border-bottom: 2px solid transparent;
+}
+.tab-btn.active {
+  border-bottom: 2px solid #1a73e8;
+  font-weight: 600;
+  color: #1a73e8;
+}
+.tab-panel pre {
+  margin: 0;
+  padding: 12px 16px;
+  background: var(--code-background, #fff);
+  color: var(--page-foreground-color, #333);
+}
+</style>
+
+<script>
+function switchTab(btn, id) {
+  document.querySelectorAll('.tab-btn').forEach(b => b.classList.remove('active'));
+  document.querySelectorAll('.tab-panel').forEach(p => p.style.display = 'none');
+  btn.classList.add('active');
+  document.getElementById(id).style.display = 'block';
+}
+</script>
+\endhtmlonly
 
-So far we have seen how pythonizations can be registered for classes that
-have not been used yet. We have discussed how, in that case, the pythonizor
-functions are executed lazily when their target class/es are used for the
-first time in the application.
-However, it can also happen that our target class/es have already been
-accessed by the time we register a pythonization. In such a scenario, the
-pythonizor is applied immediately (at registration time) to the target
-class/es    
-Let's see an example of what was just explained. We will define a new class
-and immediately create an object of that class. We can check how the object
-still does not have a new attribute `pythonized` that we are going to inject
-in the next step.
+See <a href="https://root.cern/install" style="color:#b45309;">root.cern/install</a> for all installation options.
 
-~~~{.py}
-ROOT.gInterpreter.Declare("""
-class MyClass2 {};
-""")
-o = ROOT.MyClass2()
-try:
-    print(o.pythonized)
-except AttributeError:
-    print("Object has not been pythonized yet!")
-~~~
+# Quickstart
 
-After that, we will register a pythonization for `MyClass2`. Since the class
-has already been used, the pythonization will happen right away.
+The entry point to ROOT in Python is one import:
 
 ~~~{.py}
-@pythonization('MyClass2')
-def pythonizor_for_myclass2(klass):
-    klass.pythonized = True
+import ROOT
 ~~~
 
-Now our object does have the `pythonized` attribute:
+Every ROOT class and function is available under the `ROOT` module.
 
-~~~{.py}
-print(o.pythonized) # prints True
-~~~
-
-### Pythonization printing example 
-This example illustrates the pretty printing feature of PyROOT, which reveals
-the content of the object if a string representation is requested, e.g., by
-Python's print statement. The printing behaves similar to the ROOT prompt
-powered by the C++ interpreter cling.   
-Create an object with PyROOT
+Now let's create a histogram, fill it from a [NumPy array](https://numpy.org/devdocs/reference/generated/numpy.ndarray.html) and write it to a file:
 
 ~~~{.py}
-obj = ROOT.std.vector("int")(3)
-for i in range(obj.size()):
-    obj[i] = i
-~~~
+import numpy as np
 
-Print the object, which reveals the content. Note that `print` calls the special
-method `__str__` of the object internally.
+# Create a 1D histogram
+h = ROOT.TH1D("h", "Gaussian distribution;x;counts", 100, -5, 5)
 
-~~~{.py}
-print(obj)
-~~~
-
-The output can be retrieved as string by any function that triggers the `__str__`
-special method of the object, e.g., `str` or `format`.
+# Fill it from a NumPy array
+data = np.random.normal(0, 1, 10000)
+h.Fill(data)
 
-~~~{.py}
-print(str(obj))
-print("{}".format(obj))
+# Write it to a ROOT file
+with ROOT.TFile.Open("output.root", "RECREATE") as f:
+    h.Write()
 ~~~
 
-Note that the interactive Python prompt does not call `__str__`, it calls
-`__repr__`, which implements a formal and unique string representation of
-the object.
+Now we create an RDataFrame from scratch, define a new column with a Python lambda and draw a histogram:
 
 ~~~{.py}
-print(repr(obj))
-obj
-~~~
+import numpy as np
 
-The print output behaves similar to the ROOT prompt, e.g., here for a ROOT histogram.
+# Create an RDataFrame with 10000 rows
+rdf = ROOT.RDataFrame(10000)
 
-~~~{.py}
-hist = ROOT.TH1F("name", "title", 10, 0, 1)
-print(hist)
-~~~
+# Define a column x
+rdf = rdf.Define("x", lambda : np.random.normal(0, 1))
 
-If cling cannot produce any nice representation for the class, we fall back to a
-"<ClassName at address>" format, which is what `__repr__` returns
-
-~~~{.py}
-ROOT.gInterpreter.Declare('class MyClass {};')
-m = ROOT.MyClass()
-print(m)
-print(str(m) == repr(m))
+# Draw a histogram of x
+rdf.Histo1D("x").Draw()
 ~~~

bindings/pyroot/pythonizations/doc/interop.md

@@ -0,0 +1,3 @@
+\defgroup Py_Interop Interoperability
+\ingroup Python
+\brief Using ROOT alongside other Python packages