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  1. ic50-studio ic50-studio Public

    Dose-response and IC50 analysis app with model comparison and publication-ready plots

    R

  2. MD-lipopeptide-bilayer-tutorial MD-lipopeptide-bilayer-tutorial Public

    End-to-end AMBER protocol to simulate N-acylated peptides (lipopeptides) in bacterial membranes using Lipid21 & PACKMOL-Memgen.

    M4

  3. Rkmeans Rkmeans Public

    Shiny app for structural clustering of molecules based on RMSD and k-means. It allows users to upload .cif or .pdb files, explore MDS plots, and download representative structures from each cluster…

    R

  4. ShineMD ShineMD Public

    ShineMD is an automated pure-R Shiny platform with a graphical user interface for integrated analysis of AMBER molecular dynamics trajectories.

    R

  5. TBprojections TBprojections Public

    This Shiny app projects tuberculosis (TB) case trends based on historical data. It applies various time series models and statistical tools to produce robust projections and visualize trends.

    R