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feat: finalize cells SpatialData dataset wiring#1212

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feat: finalize cells SpatialData dataset wiring#1212
timtreis wants to merge 1 commit into
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timtreis:feat/cells-test-fixture

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@timtreis

@timtreis timtreis commented Jun 15, 2026

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Follow-up to #1211 that finalizes the cells SpatialData dataset wiring.

Changes

  • datasets.yaml: set cells.zip sha256 (was null) to dc9613cb9e16fd2cd8d83f3a9586eeda4af5ba8ba366f1066efb51305820c5fb, so downloads are integrity-checked like every other dataset. Verified by clearing the cache and re-downloading — pooch validates against the hash with no mismatch.
  • docs/api.md: add datasets.visium_hne_sdata and datasets.cells to the datasets autosummary. Both SpatialData datasets were missing from the API docs.
  • tests/conftest.py: add sdata_cells fixture mirroring sdata_hne, so tests can use the cells dataset.

- datasets.yaml: set cells.zip sha256 (was null) so downloads are
  integrity-checked like every other dataset
- docs/api.md: add datasets.visium_hne_sdata and datasets.cells to the
  autosummary (both SpatialData datasets were missing from the API docs)
- tests/conftest.py: add sdata_cells fixture mirroring sdata_hne

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
@timtreis timtreis changed the title feat: finalize cells SpatialData dataset wiring (hash, docs, test fixture) feat: finalize cells SpatialData dataset wiring Jun 15, 2026
@codecov

codecov Bot commented Jun 15, 2026

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 76.13%. Comparing base (83e6511) to head (851c49b).

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #1212   +/-   ##
=======================================
  Coverage   76.13%   76.13%           
=======================================
  Files          62       62           
  Lines        8760     8760           
  Branches     1445     1445           
=======================================
  Hits         6669     6669           
  Misses       1524     1524           
  Partials      567      567           
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