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1. writhe_tools writhe_tools Public

   A high-performance Python package for computing the geometric descriptor writhe from 3D coordinate data.

   Python 22 12

2. paulrobustelli/Sisk_IDP_Writhe_2025 paulrobustelli/Sisk_IDP_Writhe_2025 Public

   Code Accompanying "Characterizing structural and kinetic ensembles of of intrinsically disordered proteins using writhe"

   Jupyter Notebook 9 3

3. paulrobustelli/Sisk_NTAIL_DeepMSM_2023 paulrobustelli/Sisk_NTAIL_DeepMSM_2023 Public

   Code accompanying "Folding-upon-binding pathways of an intrinsically disordered from a deep Markov state model" by Thomas Sisk & Paul Robustelli

   Jupyter Notebook 8 2

4. paulrobustelli/Zhu_Sisk_AR_oligomers_2025 paulrobustelli/Zhu_Sisk_AR_oligomers_2025 Public

   Code Accompanying "Molecular mechanisms of small molecules that stabilize oligomers of a phase-separating intrinsically disordered protein"

   Jupyter Notebook 1

5. paulrobustelli/Dhar_IDP_ensemble_docking_25 paulrobustelli/Dhar_IDP_ensemble_docking_25 Public

   Code Accompanying "Ensemble Docking for Intrinsically Disordered Proteins" by Anjali Dhar, Thomas R. Sisk and Paul Robustelli.

   Python 7 3

6. kaushikb1211/Borthakur_MaxEnt_IDPs_2024 kaushikb1211/Borthakur_MaxEnt_IDPs_2024 Public

   Jupyter Notebook 1 1