NeoFlow: a proteogenomics pipeline for neoantigen discovery
NeoGuider, neoepitope detection using advanced feature engineering
Mouse nEoanTigen pRedictOr
A Nextflow DSL2 pipeline for neoantigen prediction using WES and RNA-seq data.
Nextflow pipeline that annotates a VEP-annotated VCF file with transcript-level expression information using the vcf-expression-annotator tool from VAtools and performs some post-processing
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