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p-aeruginosa

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refmyoussef-source / mdr-pa-genomic-epidemiology

A reproducible Snakemake pipeline for the high-throughput genomic epidemiology of 96 MDR P. aeruginosa strains (BioProject PRJNA771342).

genomics phylogenetics bcftools snakemake-workflow iqtree p-aeruginosa

Updated Dec 25, 2025
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