[NeurIPS 2025] PanTS: The Pancreatic Tumor Segmentation Dataset. PanTS enables development and external evaluation of AI for pancreatic tumor detection, localization, and quantitative assessment, with multi-structure context and metadata to support robust, anatomy-aware modeling.

Official release of MSHT: Multi-stage Hybrid Transformer for the ROSE Image Analysis of Pancreatic Cancer IEEE JBHI https://ieeexplore.ieee.org/document/10006398

I very recently lost my amazing Mom to Pancreatic Cancer and this repository shares my story. I also will be writing stories about her and daily journal entries on how I'm feeling after the painful loss.

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models

🏆1st place in the PANORAMA challenge (early detection of PDAC on contrast-enhanced CT)

Tensorflow implementation of a 3D-CNN U-net with Grid Attention and DSV for pancreas segmentation trained on CT-82.

Pancreatic Cancer Biomarkers Identification Codes & Files

Batch-harmonized ML framework for cross-cohort RNA biomarker discovery in pancreatic adenocarcinoma — bioRxiv 2025 (doi:10.1101/2025.11.14.688421)

Graph neural networks for PDAC vs CP in histology

This is repo for the code used in (Carpenter, Elhossiny, Kadiyala et al, Cancer Discovery, 2023) paper from the Pasca lab

Resolving the GPRC5A prognostic paradox in PDAC: subtype stratification, treatment deconfounding, proteomics, AlphaFold2, ML (R) — manuscript in prep

Pancreatic Cancer Diagnosis Project; undertaken at Design and Innovation Center (DIC), an initiative of the Ministry of Human Resource and Development (MHRD), India

A concise VTK volume rendering package written to render Pancreatic Ductal Adenocarcinoma

KRAS-mutant pancreatic ductal adenocarcinoma (PDAC) is highly immunosuppressive and resistant to targeted therapies, immune checkpoint blockade and engineered T cells. In this study, we performed a systematic high throughput combinatorial drug screen and identified a synergistic interaction between the MEK inhibitor trametinib and the multi- kin…

This repository contains the code for an AI-Based Universal Lesion Segmentation application based on my master's thesis. It includes a deep learning model for CT scan segmentation, a web interface built with Vite and React, and a Flask server for backend support.

GWAS pipeline in R identifying germline variants on Chromosome 18 associated with Early-Onset Pancreatic Cancer using logistic regression.

Feature Selection benchmark and analysis on multi-omics PDAC datasets

Integrative transcriptomic profiling and differential expression analysis (DEA) to identify molecular signatures driving Perineural Invasion (PNI) in Pancreatic Ductal Adenocarcinoma using the GSE102238 dataset.

Uses a segmentation NN to count organoids in brightfield images.

A MATLAB-based analysis pipeline for pancreatic DWI (Diffusion-Weighted Imaging) research.