Pinned Loading

1. BPHL-Molecular/Amelia BPHL-Molecular/Amelia Public

   A Nextflow pipeline is used to analyze Targeted NGS of Mycoplasma genitalium. The outputs include QC, amplicon statistics, SNP calling, amino acid variation detection, etc.

   Nextflow

2. BPHL-Molecular/Sanibel BPHL-Molecular/Sanibel Public

   FL BPHL's Nextflow pipeline for bacterial WGS quality control, identification, species typing and AMR detection

   Python 6 2

3. BPHL-Molecular/Pensacola BPHL-Molecular/Pensacola Public

   A Nextflow pipeline to analyze NGS data of Candida auris from PacBio

   Perl 1 1

4. BPHL-Molecular/Daytona_HAV_VPB BPHL-Molecular/Daytona_HAV_VPB Public

   A pipeline for comprehensive sequence analyses of Hepatitis A Virus (HAV) based on VP1-P2B junction region.

   Python 1

5. BPHL-Molecular/Daytona_HCV BPHL-Molecular/Daytona_HCV Public

   A pipeline for Hepatitis C virus

   Python

6. BPHL-Molecular/Calusa BPHL-Molecular/Calusa Public

   An interactive tool for visualizing pathogen transmission networks from genomic sequence data

   HTML 3