-
Notifications
You must be signed in to change notification settings - Fork 25
Add materials from Geocomputation courses #109
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Draft
wenzeslaus
wants to merge
10
commits into
OSGeo:main
Choose a base branch
from
wenzeslaus:yale-nsf-pose-materials
base: main
Could not load branches
Branch not found: {{ refName }}
Loading
Could not load tags
Nothing to show
Loading
Are you sure you want to change the base?
Some commits from the old base branch may be removed from the timeline,
and old review comments may become outdated.
+119
−0
Draft
Changes from all commits
Commits
Show all changes
10 commits
Select commit
Hold shift + click to select a range
94b68c8
Add Spatial Ecology Geocomputation materials
wenzeslaus 44fe360
Add materials in Spanish
wenzeslaus 43f5ba1
Update categories from beginner/intermediate to advanced
wenzeslaus 5c84f8e
Add 'course' category to spatial ecology tutorial
wenzeslaus d04a1a1
Add image
wenzeslaus f39b7a4
Rename
wenzeslaus 1c7db33
Change image name
wenzeslaus 05bc42e
Change image name
wenzeslaus ab28311
Add file
wenzeslaus b8dfd6b
change image and improve
petrasovaa File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,63 @@ | ||
| --- | ||
| title: "Spatial Ecology - Geocomputation with GRASS" | ||
| author: "Giuseppe Amatulli" | ||
| date: 06/19/2025 | ||
| format: | ||
| html: | ||
| toc: true | ||
| code-tools: true | ||
| code-copy: true | ||
| code-fold: false | ||
| categories: [advanced, Bash, HPC, hydrology, external, course] | ||
| description: GRASS tutorials for geocomputation, hydrology, species distribution modeling, and HPC. | ||
| execute: | ||
| eval: false | ||
| --- | ||
|
|
||
| {.preview-image} | ||
|
|
||
| The following tutorials were developed as part of the | ||
| [Spatial Ecology courses](https://spatial-ecology.net/training/), | ||
| where students are introduced to an array of powerful open-source geocomputation tools and machine learning methodologies under the Linux environment. | ||
|
|
||
| ## GRASS Introduction | ||
|
|
||
| Learn the basics of GRASS including the data structure, command syntax, working environment, mapsets, and region settings using the command line. | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/GRASS/grass_intro.html> | ||
|
|
||
| ## Start a New GRASS Project | ||
|
|
||
| Create a new GRASS project from scratch, import data, and configure the working environment. | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/GRASS/grass_newproject.html> | ||
|
|
||
| ## Stream-Network Extraction and Basin Delineation | ||
|
|
||
| Use GRASS for hydrographic feature extraction at large scales, including tiled flow accumulation, stream network extraction, and basin delineation. Also available as a [Google Colab version](https://spatial-ecology.net/docs/build/html/GRASS/grass_hydro_colab.html). | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/GRASS/grass_hydro.html> | ||
|
|
||
| ## Species Distribution Modeling with GRASS | ||
|
|
||
| Geocomputation for a Random Forest species distribution model using GRASS to prepare environmental predictors and generate predictions. | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/GRASS/SDM1_MWood_gecomp4GRASS.html> | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/GRASS/SDM1_MWood_GRASSmodel.html> | ||
|
|
||
| ## Use of GRASS in HPC | ||
|
|
||
| Set up and run GRASS in a High Performance Computing cluster environment using Bash scripting and the Slurm queuing system. | ||
|
|
||
| <https://spatial-ecology.net/docs/build/html/HPC/hpc_setting_grass.html> | ||
|
|
||
| Video recording (29 min): <https://youtu.be/4i1Fs29D0-A> | ||
|
|
||
| --- | ||
|
|
||
| Author: Giuseppe Amatulli, Yale University / Spatial Ecology | ||
|
|
||
| These materials were developed as part of the US NSF-funded POSE project (Award 2303651). | ||
|
|
||
|
|
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change | ||||
|---|---|---|---|---|---|---|
| @@ -0,0 +1,56 @@ | ||||||
| --- | ||||||
| title: "Spatial Ecology - Geocomputación con GRASS" | ||||||
| lang: es | ||||||
| author: "Giuseppe Amatulli" | ||||||
| date: 12/19/2024 | ||||||
| format: | ||||||
| html: | ||||||
| toc: true | ||||||
| code-tools: true | ||||||
| code-copy: true | ||||||
| code-fold: false | ||||||
| categories: [advanced, Bash, HPC, hydrology, external, course, Spanish] | ||||||
| description: Curso de geocomputación con GRASS en español, incluyendo introducción, hidrología y machine learning. | ||||||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more.
Suggested change
|
||||||
| execute: | ||||||
| eval: false | ||||||
| --- | ||||||
|
|
||||||
| {.preview-image} | ||||||
|
|
||||||
| # Geocomputación para aplicaciones ambientales: uso de GDAL y GRASS | ||||||
|
|
||||||
| Curso online de 5 semanas con explicaciones en español y material en inglés. El curso incluye tres bloques dedicados a GRASS que cubren introducción, hidrología y machine learning. | ||||||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more.
Suggested change
|
||||||
|
|
||||||
| Programa del curso: <https://spatial-ecology.net/docs/build/html/COURSESAROUNDTHEWORLD/course_geocomp_11-12_2024.html> | ||||||
|
|
||||||
| ## Clase 6: Introducción a GRASS | ||||||
|
|
||||||
| Configuración del entorno de trabajo, estructura de datos, comandos básicos y scripting en Bash. | ||||||
|
|
||||||
| Video: <https://youtu.be/XlYLkgCm55A> | ||||||
|
|
||||||
| Material: <https://spatial-ecology.net/docs/build/html/GRASS/grass_intro.html> | ||||||
|
|
||||||
| ## Clase 7: Análisis hidrológico con GRASS | ||||||
|
|
||||||
| Extracción de redes de drenaje y delimitación de cuencas a gran escala. | ||||||
|
|
||||||
| Video: <https://youtu.be/230t0J_H9TY> | ||||||
|
|
||||||
| Material: <https://spatial-ecology.net/docs/build/html/GRASS/grass_hydro.html> | ||||||
|
|
||||||
| ## Clase 8: Machine Learning con GRASS | ||||||
|
|
||||||
| Modelado de distribución de especies usando Random Forest con GRASS para preparar predictores ambientales. | ||||||
|
|
||||||
| Video: <https://youtu.be/P7bJn_Lbj4A> | ||||||
|
|
||||||
| Material: <https://spatial-ecology.net/docs/build/html/GRASS/SDM1_MWood_gecomp4GRASS.html> | ||||||
|
|
||||||
| Lista completa de videos: <https://www.youtube.com/playlist?list=PL2h1_A_4X7LDPLri1UUA1_5GlRaNfIpE4> | ||||||
|
|
||||||
| --- | ||||||
|
|
||||||
| Autor: Giuseppe Amatulli, Yale University / Spatial Ecology | ||||||
|
|
||||||
| Estos materiales fueron desarrollados como parte del proyecto POSE financiado por la US National Science Foundation (NSF Award 2303651). | ||||||
Oops, something went wrong.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.