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Pull requests: scverse/PyDESeq2

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Pull requests list

Fix AttributeError when design is a DataFrame
#443 opened Apr 11, 2026 by Ekin-Kahraman Loading…
1
docs: fix broken intersphinx links
#442 opened Apr 8, 2026 by Ekin-Kahraman Loading…
1 task done
1
2
jax deseq2
#441 opened Feb 25, 2026 by adamgayoso Member Loading…
5
[pre-commit.ci] pre-commit autoupdate
#439 opened Jan 26, 2026 by pre-commit-ci bot Loading…
Normalization factors and DESeqDataSetFromTximport equivalent
#412 opened Sep 13, 2025 by maltekuehl Collaborator • Draft
2
7
fix: improve the numerical stability of lfc_shrink
#370 opened Feb 28, 2025 by BorisMuzellec Collaborator • Draft
Add Relative Log Expression (RLE) Plots
#348 opened Dec 7, 2024 by jonathjd Loading…
8
ENH volcano plots
#317 opened Sep 20, 2024 by BorisMuzellec Collaborator Loading…
4
ENH implement local fit for trend curve
#234 opened Feb 2, 2024 by BorisMuzellec Collaborator • Draft
1
Adding an example with real data
#180 opened Oct 17, 2023 by jbschiratti • Draft
FEAT: Implement Likelihood-Ratio test
#178 opened Oct 17, 2023 by PABannier • Draft
1 of 2 tasks
1
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