tools_combine_variants_wgs.cwl

Documentation for combine_variants_wgs.cwl

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Overview

CombineVariants (GATK 3.6)

Docker Requirement

mgibio/gatk-cwl:3.6.0

Inputs

Name	Label	Description	Type	Secondary Files
reference			['string', 'File']	['.fai']
mutect_vcf			File	['.tbi']
varscan_vcf			File	['.tbi']
strelka_vcf			File	['.tbi']

Outputs

Name	Label	Description	Type	Secondary Files
combined_vcf			File